Salam brother.
So what does this verse mean?
[3:59] "Indeed the case of Jesus with Allah is like the case of Adam: He created him from dust, then said to him, ‘Be,’ and he was."
Peace be on you.
Keeping in mind, it is a DIR, and also respecting if you have different understanding, with the help of various verses on the subject, the Ahmadiyya-Muslim understanding about overall picture:
".....In the Quran, dry dust or wet clay are also repeatedly mentioned as stages through which life passed in ancient times. In Surah
Al-'Imran, it states:
... He created him (Adam) out of dust (
turab)... 4
On the same subject we read the following:
... He created you from clay (humid or moist earth)... 5
Clay is also mentioned in Surah
Al-Rahman, but this time it is not wet clay which is referred to for it is clearly stated:
He created man from dry ringing clay like pieces of pottery. 6
Here its quality is described as having a plate-like appearance dry enough to create ringing sounds, like broken pieces of pottery. Again in Surah
Al-Hijr, clay is mentioned three times with the added qualification that man is created from dry ringing clay, formed out of dark fermenting mud.*
The overall scenario as presented by the Holy Quran envisions life as having been advanced step by step from dust, from water, from clay and also from fermenting blackish mud which subsequently turned into dry, ringing clay. These last two stages attract particular attention. No man of the era when the Quran was revealed could even remotely relate the creation of man to dry ringing clay made out of stagnant mud.*......."
Source:
Life in the Perspective of Quranic RevelationsâA Brief Introductory Chapter
wwwDOTalislamDOTorg/library/books/revelation/part_5_section_1.html