There were Muslims killed in separate conflicts by the government. The Indian government (Congress) are crooks who did nothing to help the situation. Please watch this:
Yeah, the number of Muslims who die is much larger than that of Kashmiri brahmins or other Hindu / Sikhs. J&K police is largely Muslim, they are attacked by terrorists. Civilian get killed in cross-fire. And then the separatists, many of them native Kashmiris, also get killed by security forces. Security forces also suffer losses. Insurgency in Jammu and Kashmir - Wikipedia