Random people force me to undergo security checks all the time. I have not threatened anyone for that so far.
What was I supposed to feel?
The TSA makes me do this. Security at some big buildings make me do this. In Jerusalem it's not "random people" and it's not "random people" in our lives either.
For intelligent people, you are very slow on the uptake.
You accept legitimate sources of authority forcing you to do things. The point is you consider them legitimate, even if this is inconvenient to you. I assume you accept that security at airports is legitimate.
You don't accept illegitimate sources of authority telling you to do things. The point is you consider them illegitimate. You wouldn't accept your neighbour's 15 year old child telling you what you could or couldn't do.
So there is a difference between walking through a metal detector at an airport and being subject to their acceptance you can proceed, and being imprisoned in your driveway until your neighbours kids allow you to proceed.
Incase you haven't noticed, the Palestinians don't consider the Israelis legitimate sources of authority over the al-Aqsa Mosque (and much else). Just like the ANC didn't consider apartheid South Africa a legitimate source of authority, or the nationalists consider the Brits a legitimate source of authority in Northern Ireland, or the Viet Minh and the French, or the Mau Mau and the Brits in Kenya, or the East Timorese and Indonesia, or the Kurds in Iraq & Turkey, etc x10000.