Well it will take me a while to believe exactly that astronomers have measured the total energy of the universe. Then you say there is no energy that needs to be created. It's a conundrum. And why? Because apparently it just happened all to come from--nothing, or something.
Again, it depends somewhat on what you mean by 'nothing'. If what you mean is 'a state of the universe where there are no particles, no space, and no time', but where the laws of physics still apply, then it is quite possible for something (the universe) to come from nothing (that state).
The point about 'negative energy' is that gravity is, in essence, a curvature of spacetime. And in the equations for energy conservation (which includes mass), the curvature also appears, but as a negative contribution. Furthermore, the relevant equation says that the total energy plus the energy of curvature is zero. In other words, it all cancels out.
This has been recognized for a long time and is the basis of many speculations of how the 'pure vacuum state' where there are no particles, space, or time can lead, through quantum tunneling to a state where there *are* particles, space, and time and with curvature to offset the energy balance. Such tunneling is allowed in quantum mechanics and *is* an example of 'something coming from nothing'.
But, ultimately, this is speculation. it is consistent with the physical laws as we know them, but there is no way currently to test this in detail. And it is far from being the only speculation that deals with these matters that is consistent with our understanding of physics.
The one thing that we do have to re-evaluate is the dogma that 'something cannot come from nothing'.